How is coevolution significant in community ecology




















Variety—the splice of life—in microbial communities. Stewart W. Cyanobacteria -cyanophage interactions in continuous culture. J Appl Microbiol. Horvath P. Williams HT. Coevolutionary diversification creates nested-modular structure in phage—bacteria interaction networks. Interface Focus. Sinsheimer RL. J Virol.

The selection mosaic and diversifying coevolution between crossbills and lodgepole pine. Am Nat. Hodgson DJ. The interactive effects of parasites disturbance, and productivity on experimental adaptive radiations.

Gandon S. Evolution of suicide as a defence strategy against pathogens in a spatially structured environment. Ecol Lett. Salmond GP. Viral evasion of a bacterial suicide system by RNA—based molecular mimicry enables infectious altruism. PLoS Genet. Lenski RE. Effect of resource enrichment on a chemostat community of bacteria and bacteriophage. The relative importance of competition and predation varies with productivity in a model community. Linking genetic change to community evolution: insights from studies of bacteria and bacteriophage.

Sandvik G. Trade-offs and coexistence in microbial microcosms. Antonie Van Leeuwenhoek. Pusch GD. Complete sequence and comparative genome analysis of the dairy bacterium Streptococcus thermophilus. Nat Biotechnol. Davidson AR. Beiko RG. Interactions in the microbiome: communities of organisms and communities of genes.

A therory of modular evolution for bacteriophages. Ann NY Acad Sci. Del Giorgio P. Key role of selective viral-induced mortality in determining marine bacterial community composition. Rohwer F. Here a virus, there a virus, everywhere the same virus? Trends Microbiol. Koskella B. Experimental coevolution of species interactions. Trends Ecol Evol. Buckling A.

Population mixing accelerates coevolution. The effect of spatial heterogeneity and parasites on the evolution of host diversity. Proc Biol Sci. Rainey PB. The effect of a bacteriophage on diversification of the opportunistic bacterial pathogen, Pseudomonas aeruginosa. Rainey P. The impact of phages on interspecific competition in experimental populations of bacteria.

BMC Ecol. Experimental coevolution with bacteria and phage The Pseudomonas fluorescens — Phi 2 model system. Infect Genet Evol. Hochberg ME. The impact of migration from parasite-free patches on antagonistic host-parasite coevolution.

Hardt W-D. Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion. Microbiol Mol Biol Rev.

The role of parasites in sympatric and allopatric host diversification. Antagonistic coevolution between a bacterium and a bacteriophage. Antagonistic coevolution with parasites increases the cost of host deleterious mutations.

Phage as agents of lateral gene transfer. Curr Opin Microbiol. Whitaker JM. J Phycol. Stewart FM. Complex community in a simple habitat — Experimental study with bacteria and phage.

Heaphy S. Phages in nature. Paul JH. Seasonal abundance of lysogenic bacteria in a subtropical estuary. Appl Environ Microbiol. Mrsa M. Co-evolution of a virus-alga system. Appl Microbiol.

Kim JF. Krebs JR. Arms races between and within species. Fano U. Bacteriophage-resistant mutants in Escherichia coli. What can phages tell us about host-pathogen coevolution? Int J Evol Biol. Hooper LV. A composite bacteriophage alters colonization by an intestinal commensal bacterium.

Burch CL. Engelen B. High virus-to-cell ratios indicate ongoing production of viruses in deep subsurface sediments. ISME J. Mekalanos JJ. Self-limiting nature of seasonal cholera epidemics: role of host-mediated amplification of phage. Weitz JS. Statistical structure of host—phage interactions. Multi-scale structure and geographic drivers of cross-infection within marine bacteria and phages. Bohannan BJM. Adaptation varies through space and time in a coevolving host-parasitoid interaction.

Gene flow reverses an adaptive cline in a coevolving host-parasitoid interaction. Coevolution drives temporal changes in fitness and diversity across environments in a bacteria-bacteriophage interaction. Effects of predation on real-time host-parasite coevolutionary dynamics. Ebert D. Time-shift experiments as a tool to study antagonistic coevolution.

Michalakis Y. Local adaptation, evolutionary potential and host-parasite coevolution: interactions between migration, mutation, population size and generation time.

J Evol Biol. Day T. Host-parasite coevolution and patterns of adaptation across time and space. Bacteria-phage antagonistic coevolution in soil. Coevolution with phages does not influence the evolution of bacterial mutation rates in soil.

Bacteria-phage coevolution and the emergence of generalist pathogens. Host-parasite coevolutionary arms races give way to fluctuating selection.

Bull JJ. Impact of phages on two-species bacterial communities. Brockhurst MA. Rapidly fluctuating environments constrain coevolutionary arms races by impeding selective sweeps. Optimal foraging by bacteriophages through host avoidance. Whitaker RJ. Viral biogeography revealed by signatures in Sulfolobus islandicus genomes. PLoS One. Coevolution of Escherichia coli and bacteriophages in chemostat culture.

Fukatsu T. Strict host-symbiont cospeciation and reductive genome evolution in insect gut bacteria. PLoS Biol. Predation in homogeneous and heterogeneous phage environments affects virulence determinants of Pseudomonas aeruginosa.

Svenningsen SL. A quorum-sensing-induced bacteriophage defense mechanism. Abedon ST. Bacteriophage host range and bacterial resistance. Adv Appl Microbiol.

When is it coevolution? Bohannan BJ. The shape of an ecological trade-off varies with environment. Harvill E. Bacteriophage-mediated competition in Bordetella bacteria. Wiese J. Temporal variations in the concentrations of bacteria and their lytic phages: an example of an indigenous phage host system in Lake Plusharpsee, Germany.

Fundam Appl Limnol. Cho JC. Genome of a SAR bacteriophage shows the prevalence of this phage type in the oceans.

Wegner KM. Antagonistic experimental coevolution with a parasite increases host recombination frequency. BMC Evol Biol. Miller RV. Evidence for phage-mediated gene transfer among Pseudomonas aeruginosa strains on the phylloplane. Yoshida T.

Rapid Microcystis cyanophage gene diversification revealed by long- and short-term genetic analyses of the tail sheath gene in a natural pond. Phage-mediated selection on microbiota of a long-lived host. Curr Biol. Lively CM. Evidence for negative frequency-dependent selection during experimental coevolution of a freshwater snail and a sterilizing trematode.

Meaden S. Understanding bacteriophage specificity in natural microbial communities. Local biotic environment shapes the spatial scale of bacteriophage adaptation to bacteria. Thompson JN. The costs of evolving resistance in heterogeneous parasite environments. A bacterial metapopulation adapts locally to phage predation despite global dispersal.

Genome Res. Sako Y. Intricate interactions between the bloom-forming cyanobacterium Microcystis aeruginosa and foreign genetic elements, revealed by diversified clustered regularly interspaced short palindromic repeat CRISPR signatures. Moineau S. Bacteriophage resistance mechanisms. Nat Rev Microbiol. Martiny JB. Is there a cost of virus resistance in marine cyanobacteria? Experimental studies of pleiotropy and epistasis in Escherichia coli.

Compensation for maladaptive effects associated with resistance to virus T4. Levin BR. Constraints on the coevolution of bacteria and virulent phage — a model, some experiments, and predictions for natural communities. Barrangou R. Chen T-S. A T3 and T7 recombinant phage acquires efficient adsorption and a broader host range.

Migration, virulence, and the geographic mosaic of adaptation by parasites. Geographical covariation and local convergence of flower depth in a guild of fly-pollinated plants. New Phytologist. Article Google Scholar. Archibald JM. The origin and spread of eukaryotic photosynthesis: evolving views in light of genomics.

Bot Mar. Bascompte J, Jordano P. Plant-animal mutualistic networks: the architecture of biodiversity. Ann Rev Ecol, Evolut, Systs.

Asymmetric coevolutionary networks facilitate biodiversity maintenance. Macroevolutionary chemical escalation in an ancient plant-herbivore arms race.

Benkman CW. Diversifying coevolution between crossbills and conifers. Evolution: Education and Outreach. Coevolution between crossbills and black pine: the importance of competitors, forest area and resource stability.

Chemical phenotype matching between a plant and its insect herbivore. Brockhurst M. Using microbial microcosms to study host-parasite coevoluiton. The evolutionary response of predators to dangerous prey: hotspots and coldspots in the geographic mosaic of coevolution between newts and snakes. Brodie EDI et al. Parallel arms races between garter snakes and newts involving tetrodotoxin as the phenotypic interface of coevolution.

J Chem Ecol. Coevolutionary patterns in the Linum marginale—Melampsora lini association at a continental scale. Can J Bot. Cavalier-Smith T. Predation and eukaryote cell origins: a coevolutionary perspective. Int J Biochem Cell Biol.

An experimental study of co-evolution between the cuckoo, Cuculus canorus , and its hosts. Host egg markings, chick discrimination and general discussion. J Anim Ecol. Douglas, AE. The microbial dimension in insect nutritional ecology. Funct Ecol. Edelaar P, Benkman CW. Replicated population divergence caused by localized coevolution?

A test of three hypotheses in the red crossbill-lodgepole pine system. Butterflies and plants: a study in coevolution. Farrell BD. Gene flow reverses an adaptive cline in a coevolving host-parasitoid interaction.

Am Nat. Futuyma DJ. Sunderland, Massachusetts: Sinauer Associates; Google Scholar. Interaction intimacy affects structure and coevolutionary dynamics in mutualistic networks. Curr Biol. A tropical hawkmoth community: Costa Rican dry forest Sphingidae. Phenotypic mismatches reveal escape from arms-race coevolution. PLOS Biology. Johnson SD, Anderson R. Coevolution between food-rewarding flowers and their pollinators.

Jordano P. Coevolution in multi-specific interactions among free-living species. The geographic mosaic of the Red Queen: more sex in coevolutionary hotspots. Current Biology. Laine A-L. Spatial scale of local adaptation in a plant-pathogen metapopulation. Lake JA. Evidence for an early prokaryotic endosymbiosis.

Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution. Transfer of photosynthesis genes to and from Prochlorococcus viruses. Lively CM. Antagonistic coevolution and sex. Increasing productivity accelerates host—parasite coevolution. Losos JB. Lizards in an evolutionary tree: ecology and adaptive radiation of anoles. Berkeley: University of California Press; Temporal lags and overlap in the diversification of weevils and flowering plants.

Medel R. Arms race coevolution: the local and geographic structure of a host-parasite interaction. Genomics and evolution of heritable bacterial symbionts.

Annu Rev Genet. Nakagawa S, Takai K. Deep-sea vent chemoautotrophs: diversity, biochemistry and ecological significance. A mosaic of chemical coevolution in a large blue butterfly. Complex coevolutionary history of symbiotic Bacteroidales bacteria of various protists in the gut of termites.

BMC Evol Biol. Coevolutionary alternation in antagonistic interactions. The geographic selection mosaic for ponderosa pine and crosbills: a tale of two squirrels. Pfennig K, Pfennig D. Character displacement: ecological and reproductive responses to a common evolutionary problem. Q Rev Biol. Interactions of biotic and abiotic environmental factors on an ectomycorrhizal symbiosis, and the potential for selection mosaics.

BMC Biology. The gut microbiota shapes intestinal immune responses during health and disease. Nat Rev Immunol. Schluter D. The ecology of adaptive radiation. Oxford: Oxford University Press; Resource competition and coevolution in sticklebacks. Segraves KA. Branching out with coevolutionary trees. Sharon I et al. Photosystem I gene cassettes are present in marine virus genomes. Convergent patterns in the selection mosaic for two North American bird-dispersed pines. Ecol Monogr. Adaptation in a plant-hummingbird association.

Thompson JN. This approach has documented both conflicting [61] , [62] and nonconflicting coevolution [63] — [65]. There is a rich theory describing the evolution of mutualisms [66] , [67].

Theoretical predictions often suggest that mutualistic interactions have the potential to break down into parasitic interactions [47] , [68] , [69] ; this is an extreme form of conflicting interests between species. If mutualism breakdown into parasitism is common, then conflicting coevolution is likely, and this will likely diminish the effects of climate change.

Nonetheless, if mutualistic partners can enforce good behavior of their partners [68] , then nonconflicting coevolution is expected.

For example, the plant Medicago truncatula discriminately rewards the most beneficial mycorrhizal partners with more carbohydrates, and mycorrhizal partners form partnerships only with the roots that provide the most carbohydrates [7]. Thus, each partner constrains the selection pressure of the other to allow only nonconflicting coevolution. If nonconflicting coevolution is frequently imposed by mutualists, our results suggest that coevolution between mutualistic species will exaggerate, rather than diminish, the effects of climate change on species densities.

Conflicting coevolution is expected for most types of predator-prey or consumer-resource interactions, because increases in prey defenses will decrease benefits to predators, and increases in predator effectiveness will be detrimental to prey. Nonetheless, evolution of parasite virulence could be different [70] , [71].

The conventional wisdom is that parasites should evolve to be less virulent, because this will increase their transmission among hosts; parasites are not transmitted by dead hosts, at least not for long [72]. Nonetheless, this ignores, among other things, the relationship between the production of large numbers of propagules that generally harms the host and transmission rates, and more-detailed analyses generally predict evolution of parasite virulence to represent a balance between higher virulence caused by selection for production of propagules and lower virulence caused by selection for lengthening the transmission period [73].

Therefore, evolution of the parasite may be nonconflicting with the host, even at the same time evolution of the host to limit infection is conflicting with the parasite. In models describing this interaction results not shown , we found that when climatic changes directly affect the parasite, coevolution in the host fuels a negative feedback loop that mitigates the effects of climate change.

In contrast, in some cases when climatic changes directly affect the host, coevolution can lead to a positive feedback loop that exaggerates the effects of climate change on the host density. Thus, when there are both conflicting and nonconflicting coevolution, the ultimate outcome will be determined by whether the host or parasite experiences greater evolutionary change.

Given the widespread occurrences of both conflicting and nonconflicting coevolution in competition and mutualism, and to a lesser extent in predator-prey interactions, systems will have to be studied on a case-by-case basis to predict and test the role of coevolution in modifying the effects of climate change. This could be done either using experimental studies or taking advantage of naturally occurring environmental gradients.

An example of an experimental study is given by Lopez-Pascua and Buckling [74] , who performed an environmental manipulation of bacterial productivity by altering nutrient concentrations in the growth media. They showed that increasing bacterial productivity increases the rate of coevolution between bacteria and phages.

They proposed that this is due, in part, to increased selection pressure on the bacterial population in environments with high productivity high intrinsic rates of bacterial increase. This increased selection stems from increased encounters with phages, as phages numerically respond to increased bacterial density.

The phages then evolve greater infectivity in response to bacterial evolution. This explanation is consistent with our theoretical expectations for conflicting evolution of prey and predators; increasing the prey intrinsic rate of increase leads to evolution of stronger prey defenses against the predator Figure 4C.

In addition to experimental manipulations of environmental factors, it is possible to take advantage of natural environmental gradients similar to classical studies of character displacement.

For example, in a field experiment, Toju et al. Female beetles use their snout to pierce the camellia fruit pericarp and oviposit eggs into seeds, with oviposition success determined by the length of the beetle's snout and ovipositor relative to the pericarp thickness. Thus, plant defense is determined by pericarp thickness, and beetle snout and ovipositor lengths determine beetle ability to overcome this defense.

The authors measured beetle and plant traits along a latitudinal gradient, and previous work had showed that plants exhibit faster potential for growth at lower latitudes [76]. Thus, in the camellia-beetle arms race we expect that coevolution will favor plants more at lower latitudes. The authors indeed found this to be the case; plants in high latitude populations that experienced endemic predation by beetles had pericarp thicknesses similar to populations that did not experience beetles.

In contrast, at lower latitudes plant populations that experienced beetle predation had thicker pericarps than populations that did not. There was thus an increase in plant defense along the environmental gradient. Furthermore, this plant defense increased with decreasing latitude at a greater rate than weevil ovipositor length, suggesting that plants exhibited a larger coevolutionary advantage in environmental conditions with increased prey growth [75].

These results support our theoretical predictions that higher prey intrinsic rates of increase should lead to a coevolutionary advantage to prey, thereby buffering the changes in predator densities driven by climate change. The majority of coevolutionary studies involving environmental manipulations or environmental gradients have been conducted on predator-prey or herbivore-plant systems where conflicting coevolution is likely. Similar experiments that document changes in traits and density might help build a better understanding of coevolution in competitive and mutualistic relationships.

Laboratory studies have suggested that coevolution can lead to a reversal of competitive hierarchy in just 24 generations [15] , and can occur fast enough to drive population dynamics [16]. Therefore, experimental competition studies in which environmental factors are manipulated are possible for some types of organisms. Environmental gradient, rather than experimental, studies will be more practical for larger organisms with longer lifespans that operate at larger spatial scales.

Using character displacement to infer conflicting versus nonconflicting coevolution is necessarily correlative, although it opens up the study of coevolution in the context of climate change to a much wider range of species under natural spatial and temporal scales.

Studies that evaluate coevolution over environmental gradients fit within the broader conceptual paradigm of geographic mosaic theory [77] in which differences in coevolutionary selection among spatially separated populations are analyzed as genotype by genotype by environment interactions. A key feature of geographic mosaic theory is that some local populations experience environmental conditions under which coevolutionary pressures are strong. This pair of equations has the same general structure as that we have used for Equations 1 — 4.

Thus, our results address the possible character of evolution within coevolutionary hotspots, and how coevolutionary outcomes might differ under different environmental regimes.

We have only considered local populations, explicitly ignoring gene flow among populations. Thus, we have ignored the large body of theoretical and empirical studies evaluating gene flow among populations under different selective forces [77] — [79].

For example, Nuismer et al. When interaction types vary spatially, however, both dynamic and equilibrium clines occur, and the presence of each depends on the levels of selection and gene flow across the landscape [80]. In an experimental bacteria-bacteriophage community, bacteriophages became locally maladapted in the absence of gene flow, but became locally adapted when gene flow occurred between bacteriophage populations [81].

The importance of gene flow in both theoretical and empirical studies gives a caution to our recommendation that natural environmental gradients be used to assess the character of coevolution—conflicting versus nonconflicting—and whether coevolution sets up positive or negative feedback loops to environmental changes.

Gene flow and a geographic mosaic of selective pressure may dampen or otherwise modify the effects of local selection on coevolutionary traits.

While it is recognized that evolution will play a role in determining how climatic changes directly affect species [18] , the interactions among species force us to also consider coevolution between species. Our models suggest that the effects of coevolution on population densities depend on the presence of conflicting versus nonconflicting coevolutionary interests.

While we encourage future studies that experimentally manipulate both coevolution and environmental change, we acknowledge that experiments are likely to be difficult logistically for most study systems. It may be possible, however, to use character displacement across environmental gradients to distinguish whether conflicting versus nonconflicting coevolution is more likely, even when directly measuring coevolution is impossible.

Experimental [15] and environmental gradient [60] approaches to infer the nature of coevolution are both five decades old, and we hope that our theoretical results provide new impetus for these types of studies. They give needed information to anticipate whether coevolution will increase or decrease the effects of climate change on the densities of interacting species.

Generalist predator equilibrium densities and traits. Equilibrium values of prey and generalist predator population densities A, B and traits C, D for different climatic conditions. A, C The prey intrinsic rate of increase rose linearly with climate E , while the predation rate was unaffected. B, D The predation rate increased linearly with climate E , while prey growth was unaffected.

Analytical approximation for changes in species abundances with coevolution. Rosenheim, B. Barton, H. Fan, C. Herren, B. Krimmel, M. Meisner, E. Murell, A. Sadeh, J. Usinowicz, K.

Webert, and K. Zemenick provided helpful discussion. Abstract Background Recent studies suggest that environmental changes may tip the balance between interacting species, leading to the extinction of one or more species. Author Summary Recent studies suggest that environmental changes may tip the balance between species that interact with each other, leading to the extinction of one or more species.

Introduction Climatic changes, or indeed any change in the environment, have the potential to cause the local extinction of species, and to alter community composition and ecosystem functioning [1]. Modeling Coevolution To evaluate the effects of climate change, we present three coevolutionary models describing competitive, mutualistic, and predator-prey relationships between two species. Box 1. Analysis of Coevolution during Climate Change To analyze the effects on densities and species traits that climate-driven changes in intrinsic rates of increase can have, we used an analytical approach akin to loop analysis [82].

Competition We modeled coevolution of two competitors using a discrete-time, modified Lotka-Volterra competition model. Mutualism The model for two mutualists has the same structure as the competition model 1. Predation For predator-prey interactions we used a discrete-time version of a model in which the predator attack rate is determined by traits of both prey, 1, t , and predator, 2, t [51].

Results To illustrate the importance of coevolution—especially the contrast between conflicting and nonconflicting coevolution—for the response of populations to environmental changes, we conducted two types of simulations.

Competition To illustrate the competition model, we began by simulating the consequences of raising the environmental quality for species 1 increasing E through time while varying the rate of coevolution. Download: PPT. Mutualism As with competition, the effects of coevolution on mutualists depended on the type of coevolution. Predation For competition and mutualism, interacting species might have either conflicting or nonconflicting coevolutionary feedbacks.

Discussion We have shown, using simple models, that coevolution may increase or decrease the effect of environmental change, depending on the form that coevolution takes between species. Competitive Coevolution It has long been recognized that coevolution can lead to increased asymmetries in competitive abilities [15] , which is the hallmark of conflicting coevolution. Mutualistic Coevolution There is a rich theory describing the evolution of mutualisms [66] , [67].

Predator-Prey Coevolution Conflicting coevolution is expected for most types of predator-prey or consumer-resource interactions, because increases in prey defenses will decrease benefits to predators, and increases in predator effectiveness will be detrimental to prey. Predicting the Effects of Climate Change Given the widespread occurrences of both conflicting and nonconflicting coevolution in competition and mutualism, and to a lesser extent in predator-prey interactions, systems will have to be studied on a case-by-case basis to predict and test the role of coevolution in modifying the effects of climate change.

Conclusions While it is recognized that evolution will play a role in determining how climatic changes directly affect species [18] , the interactions among species force us to also consider coevolution between species. Supporting Information. Figure S1. Text S1. Acknowledgments J. References 1. Nature — View Article Google Scholar 2. Ecography — View Article Google Scholar 3.

Science — View Article Google Scholar 4. Ecol Lett — View Article Google Scholar 5. View Article Google Scholar 6. View Article Google Scholar 7. View Article Google Scholar 8. View Article Google Scholar 9. Barton BT Local adaptation to temperature conserves top-down control in a grassland food web.

View Article Google Scholar Jump AS, Penuelas J Running to stand still: adaptation and the response of plants to rapid climate change. Ecol Lett 8: — Schoener TW The newest synthesis: understanding the interplay of evolutionary and ecological dynamics. Zhang QG, Buckling A Antagonistic coevolution limits population persistence of a virus in a thermally deteriorating environment.

Am Nat 97— Nat Clim Change 2: — Ecography 1— Am Nat — Abrams PA, Vos M Adaptation, density dependence and the responses of trophic level abundances to mortality.



0コメント

  • 1000 / 1000